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학과소개

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학과소개
김창배 사진
김창배
  • 학위: 박사
  • 연구실 : (S관)중앙교수회관 (S217)
  • 연락처 : 02-2287-5288
  • 세부전공 : 생물정보학
홈 이메일
학위
  • 박사, 서울대학교 동물학과 (세부전공 : 동물계통분류학), 199102
  • 석사, 서울대학교 동물학과 (세부전공 : 동물분류학), 198602
  • 학사, 성균관대학교(자연과학캠퍼스) 생물학과 (세부전공 : 생물학), 198402
경력
  • 공동편집위원장, 한국동물분류학회, (2011.09~2013.08)
  • 책임연구원, 한국생명공학연구원, (2000.10~2008.02)
  • 박사후연구원, Yale University, (1996.03~2000.10)
논문
  • Identification of Gluconacetobacter xylinus LYP25 and application to bacterial cellulose production in biomass hydrolysate with acetic acid, International Journal of Biological Macromolecules, 202401
  • Deep learning-based image classification of turtles imported into Korea, Scientific Reports, 202312
  • Metabarcoding by Combining Environmental DNA with Environmental RNA to Monitor Fish Species in the Han River, Korea, Fishes, 202311
  • Pathway-dependent toxic interaction between polystyrene microbeads and methylmercury on the brackish water flea Diaphanosoma celebensis: Based on mercury bioaccumulation, cytotoxicity, and transcriptomic analysis, JOURNAL OF HAZARDOUS MATERIALS, 202310
  • Comparative transcriptome analysis of two Daphnia galeata genotypes displaying contrasting phenotypic variation induced by fish kairomones in the same environment of the Han River, Korea, BMC GENOMICS, 202310
  • A New Record of Phyllidia varicosa (Nudibranchia: Phyllidiidae) from Korea, 한국동물분류학회지, 202310
  • 국가바이오포렌식포털시스템: 비인체 법생물을 위한 데이터베이스 및 기계학습 기반 분석시스템, 법과학의신동향, 202310
  • Molecular identification of selected parrot eggs using a non-destructive sampling method, 환경생물, 202306
  • PRR-HyPred: A two-layer hybrid framework to predict pattern recognition receptors and their families by employing sequence encoded optimal features, International Journal of Biological Macromolecules, 202304
  • Analysis of the complete mitogenome of Daphnia galeata from the Han River, South Korea: structure comparison and control region evolution, FUNCTIONAL & INTEGRATIVE GENOMICS, 202303
  • A case study on DNA barcoding for pet food mislabeling in South Korea, Italian Journal of Food Safety, 202303
  • GPApred: The first computational predictor for identifying proteins with LPXTG-like motif using sequence-based optimal features, International Journal of Biological Macromolecules, 202302
  • Insights into the biodegradation and heavy metal resistance potential of the genus Brevibacillus through comparative genome analyses, Gene, 202212
  • Comparative Transcriptome Analysis of Eriocheir sinensis from Wild Habitats in Han River, Korea, life, 202212
  • Comparative Analysis of Complete Mitogenomes of Two Oxyurichthys Gobies and Their Phylogenetic Implication, Zoological Studies, 202212
  • Molecular phylogeny of selected dorid nudibranchs based on complete mitochondrial genome, Scientific Reports, 202211
  • Machine Learning Models for Identification and Prediction of Toxic Organic Compounds Using Daphnia magna Transcriptomic Profiles, life, 202209
  • Image Classification of Amazon Parrots by Deep Learning: A Potentially Useful Tool for Wildlife Conservation, Biology, 202209
  • Redescription of three trapanian nudibranchs (Nudibranchia, Goniodorididae) from Korea with a key to the species, Journal of Species Research, 202208
  • C10Pred: A First Machine Learning Based Tool to Predict C10 Family Cysteine Peptidases Using Sequence-Derived Features, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 202208
  • Comparative analysis of complete mitochondrial genomes of three Trichoglossus species (Psittaciformes: Psittacidae), MOLECULAR BIOLOGY REPORTS, 202207
  • Seasonal Diversity of Microeukaryotes in the Han River, Korea Through 18S rRNA Gene Metabarcoding, Evolutionary Bioinformatics, 202201
  • Development of the new microsatellite markers of Lucilia sericata (Diptera: Calliphoridae) from Korea, MOLECULAR BIOLOGY REPORTS, 202112
  • SortPred: The first machine learning based predictor to identify bacterial sortases and their classes using sequence-derived information, Computational and Structural Biotechnology Journal, 202112
  • Development of polymorphic microsatellite markers for the Trichoglossus haematodus and cross-species amplification in Trichoglossus moluccanus, MOLECULAR BIOLOGY REPORTS, 202107
  • An Investigation of the Variations in Complete Mitochondrial Genomes of Lingula anatina in the Western Pacific Region, BIOLOGY-BASEL, 202105
  • Sequencing and analysis of the mitochondrial genome of Pennahia anea (Bloch, 1793) (Perciformes: Sciaenidae), MITOCHONDRIAL DNA PART B-RESOURCES, 202104
  • The complete mitochondrial genome of Scyra compressipes Stimpson, 1857 (Decapoda: Epialtidae), MITOCHONDRIAL DNA PART B-RESOURCES, 202103
  • Characterization of the complete mitochondrial genome of Okenia hiroi (Baba, 1938) (Nudibranchia, Goniodorididae), MITOCHONDRIAL DNA PART B-RESOURCES, 202103
  • Improved Glucose Recovery from Sicyos angulatus by NaOH Pretreatment and Application to Bioethanol Produc, PROCESSES, 202102
  • Characterization and Comparative Analysis of Complete Mitogenomes of Three Cacatua Parrots (Psittaciformes: Cacatuidae), GENES, 202102
  • Image Identification of Multiple Parrot Species Belonging to CITES Using Deep Neural Networks, Lecture Notes in Computer Science, 202102
  • Role of Transportome in the Gills of Chinese Mitten Crabs in Response to Salinity Change: A Meta-Analysis of RNA-Seq Datasets, BIOLOGY-BASEL, 202101
저역서
  • Lewis 인체유전학 개념 및 응용 13판, 교문사, 20230224
  • 동물 다양성 8판, 라이프사이언스, 202001
  • 국가생물종 목록 무척추동물 VII, 환경부 국립생물자원관, 20151130
  • 진화학, 월드사이언스, 20140825
  • 동물 다양성 6판, (주)라이프사이언스, 20130901
지식재산
  • 비인체 법생물을 위한 데이터베이스 및 기계 학습 기반 분석 방법 및 이러한 방법을 수행하는 장치, 상명대학교산학협력단, 20231025
  • 인공지능을 기반으로 한 불법 양귀비 판단 방법 및 이러한 방법을 수행하는 장치, 상명대학교산학협력단, 20230831
  • 고래 불법포획 감식용 신속진단키트, 대한민국(해양경찰청 해양경찰연구센터장), 20230523
  • 비파괴 샘플링 방법으로 앵무새 알 껍질 시료를 분리하고 분자동정에 적용하는 방법, 상명대학교산학협력단, 20230410
  • 멸종위기종 판별을 위한 DNA 분석 지침서, 20201230
  • 국가바이오포렌식시스템, 한국생명공학연구원, 20180321
  • 16S rRNA(16에스 리보솜 알엔에이) 분석시스템, 한국생명공학연구원, 20180315
  • 18S rRNA(18에스 리보솜 알엔에이) 분석시스템, 한국생명공학연구원, 20180315
  • DNA 패턴 유사성검출, 상명대학교산학협력단, 20170905
  • 생물종 판별을 위한 바코드 마커 서열 검색시스템, 한국생명공학연구원, 20170731
  • 비인체 법생물종 데이터베이스 시스템, 한국생명공학연구원, 20170731
  • 섬모충 관련 형태학적 특징정보 추출 및 데이터베이스 시스템, 한국생명공학연구원, 20160929
  • 한반도 자생식물 종명 데이터베이스 시스템, 한국생명공학연구원, 20160929
  • 계층형 생명정보의 검색을 위한 데이터데이베이스 시스템, 한국생명공학연구원, 20160929
학술발표
  • A Preliminary Study of Image Classification of Vessel Biofouling by Deep Learning, 한국해양학회 , 20231101
  • Deep Learning-based Image Classification of Five Sea Turtel Species Native to Korea, 한국해양학회 , 20231101
  • 딥러닝 기반 생물 이미지 분류 연구 동향 강연, 한국동물분류학회 , 20231025
  • Machine learning system for finding indicator species by using fish environmental DNA and its application for water quality assessment , 한국환경생물학회 , 20231018
  • A machine learning approach to identify the aquatic environmental pollutants and the predator-induced response by utilizing transcriptome data in Daphnia, 한국환경생물학회 , 20231018
  • Environmental Metagenomics of Microbiome for Monitoring Aquatic Wildlife Health, 한국생물과학협회, 20230810
  • Image Classification of the Two Nudibranch Species, Phyllidia picta and Phyllidiella pustulosa, by Using Deep Learning, 한국생물과학협회, 20230810
  • Machine Learning-based Mitochondrial DNA Classifier from Metagenomics Data for Rapid and Accurate Assembly of Fish Mitochondrial Genome, 한국생물과학협회 , 20230810
  • Understanding predator-induced adaptive mechanisms through phenotypic variation and transcriptome analysis of Daphnia galeata in the Han River, Korea, 한국생물과학협회 , 20230810
  • 인공지능 기술을 활용한 e-multiomics 정보 분석과 전망, 한국생물과학협회 , 20230810
  • 인공지능 기술과 해양생물다양성, (사)한국해양생명과학회, 20230629
  • 고래 혈흔반응 신속검사키트 개발, 대검찰청, 20230511
  • Transcriptome analysis for understanding predator-induced response and identification of environmental factors using machine learning approach in Daphnia, 한국환경유전자학회, 20221215
  • Machine learning approaches for environmental DNA analysis, 한국환경유전자학회, 20221215
  • Assessment of Fish Biodiversity based on Environmental DNA and RNA Metabarcoding Analysis in Paldang Lake, Korea, 한국환경유전자학회, 20221215
  • Environmental DNA mitochondrial metagenomics using Oxford Nanopore PromethION sequencing: A case study of Siniperca scherzeri from the aquarium, 한국환경유전자학회, 20221215
  • Deep learning-based image classification of fishes living in Paldang Lake, Korea, for assessing fish biodiversity, 한국환경유전자학회, 20221215
  • Machine Learning-based Identification and Prediction of Environmental Factors Using Transcriptome of Daphnia magna, 한국생물과학협회, 20220812
  • Image Classification of the Genus Amazona (Psittaciformes: Psittacidae) by Detection Model based on Deep Learning , 한국생물과학협회, 20220812
  • Image Classification of Endangered Sea Turtles by Deep Learning, 한국생물과학협회, 20220812
  • Species Identification of Oncorhynchus Using XGBoost Model Based on Machine Learning Approach, 한국생물과학협회, 20220812
  • Deep learning-based Image Classification of Endangered Species and Wildlife, 한국생물과학협회, 20220810
  • Identification and Prediction of Environmental Factors Using Transcriptome based on Machine Learning, 한국생물과학협회, 20220810
  • Species Identification for Environmental DNA-based Biodiversity Monitoring Using Supervised Machine Learning, 한국생물과학협회, 20220810
  • 딥러닝 기반 영상인식 기술을 이용한 국제적멸종위기종 식별, 대검찰청, 20220531
  • A Machine Learning Approach for Prediction Environmental Factors using Gene, 한국유전학회, 20211021
  • The Molecular Phylogenetic Analysis of Myoglobin in Cetacea, 한국유전학회, 20211021
  • Identification of Three Cacatua Species by Object Detection Based on Deep Neural Networks, 한국생물과학협회, 20210813
  • Identification of Seven Species of Korean Daphnia Using Machine Learning-based XGBoost Model, 한국생물과학협회, 20210813
수상
  • 제6회 대한민국 봉사대상 교육대상, 월드그린환경연합중앙회, 201312
  • 제13회 과학기술우수논문상, 한국과학기술총연합회, 200304
프로젝트
  • 어반스테이트 컴퍼니, 인공지능 기반 빅데이터를 활용한 쌍령근린공원의 사람-생물-환경-역사 초연결 지능형 플랫폼 구축, (2023.06~2023.12)
  • 한국연구재단, 한국 유리물벼룩의 포식자 유도 적응 이해를 위한 유전체 연구, (2022.03~2025.02)
  • 해양경찰연구센터, 고래 혈흔반응 신속검사키트 개발, (2021.06~2022.12)
  • 국립생물자원관, 생물정보 빅데이터 활용 전문인력 양성, (2021.05~2023.11)
  • 해외 해양생물자원 개발 및 활용기반 구축, 해양수산과학기술진흥원, (2020.02~2020.12)
  • 멸종위기종 모니터링 및 지능형 객체 인식 기술 개발, 한국환경산업기술원, (2018.07~2020.12)
  • 미토콘드리아 유전체에 의거한 해양 후새류 연체동물 계통연구, 한국연구재단, (2018.06~2021.05)
  • 해양생물자원 기타무척추(완족,성구,유형,편형) 기탁등록보존기관, 국립해양생물자원관, (2017.06~2017.12)
  • 수중 증거물,변사체 이동경로 및 입수경과시간 분석 기술 개발 사전기획 연구용역, 경찰청, (2017.04~2017.06)
  • 무척추동물 해외해양생물시료 분석 시행, 국립해양생물자원관, (2016.12~2017.03)
  • 인공지능 기술을 활용한 법과학 생체정보 증거의 정량 평가시스템 개발, 한국연구재단, (2016.07~2021.03)
  • 기계학습을 적용한 법 생물 DNA의 종판별 시스템 구축, 한국연구재단, (2016.07~2021.03)
  • 성구,완족 및 완보 등 동물 해외해양생물시료 분석 수행, 국립해양생물자원관, (2016.03~2016.08)
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